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LOC105791300 transcription factor MYC2 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105791300, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105791300
Gene description
transcription factor MYC2
Locus tag
B456_004G129600
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105791300 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 8 NC_068572.1 (34908197..34910020, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 4 NC_026932.1 (34739535..34741362, complement)

Chromosome 8 - NC_068572.1Genomic Context describing neighboring genes Neighboring gene NAC domain-containing protein 43 Neighboring gene uncharacterized LOC105793267 Neighboring gene uncharacterized LOC128043033 Neighboring gene small nucleolar RNA R71

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor MYC2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068572.1 Reference ASM2569854v1 Primary Assembly

    Range
    34908197..34910020 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012619320.2 → XP_012474774.1  transcription factor MYC2

    See identical proteins and their annotated locations for XP_012474774.1

    UniProtKB/TrEMBL
    A0A0D2PB73
    Conserved Domains (2) summary
    pfam14215
    Location:21 → 198
    bHLH-MYC_N; bHLH-MYC and R2R3-MYB transcription factors N-terminal
    cl00081
    Location:286 → 359
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
Nucleotide Protein
Heading Accession and Version

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