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LOC105791160 uncharacterized LOC105791160 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105791160, updated on 10-Oct-2024

Summary

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Gene symbol
LOC105791160
Gene description
uncharacterized LOC105791160
Locus tag
B456_004G117900
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105791160 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 8 NC_068572.1 (28790037..28794966, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 4 NC_026932.1 (28645329..28650400, complement)

Chromosome 8 - NC_068572.1Genomic Context describing neighboring genes Neighboring gene BAHD acyltransferase DCR Neighboring gene short-chain dehydrogenase TIC 32, chloroplastic Neighboring gene 60S ribosomal protein L36-2 Neighboring gene uncharacterized LOC105791161

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC105791160

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068572.1 Reference ASM2569854v1 Primary Assembly

    Range
    28790037..28794966 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052635254.1 → XP_052491214.1  uncharacterized protein LOC105791160 isoform X2

    UniProtKB/TrEMBL
    A0A0D2PAI1

  2. XM_012619105.2 → XP_012474559.1  uncharacterized protein LOC105791160 isoform X1

    See identical proteins and their annotated locations for XP_012474559.1

    UniProtKB/TrEMBL
    A0A0D2RXL9, A0A0D2RXM4
    Conserved Domains (1) summary
    pfam00096
    Location:63 → 84
    zf-C2H2; Zinc finger, C2H2 type

  3. XM_012619104.2 → XP_012474558.1  uncharacterized protein LOC105791160 isoform X1

    See identical proteins and their annotated locations for XP_012474558.1

    UniProtKB/TrEMBL
    A0A0D2RXL9, A0A0D2RXM4
    Conserved Domains (1) summary
    pfam00096
    Location:63 → 84
    zf-C2H2; Zinc finger, C2H2 type
Nucleotide Protein
Heading Accession and Version

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