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LOC105790685 protein indeterminate-domain 12 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105790685, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105790685
Gene description
protein indeterminate-domain 12
Locus tag
B456_004G076800
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105790685 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 8 NC_068572.1 (8866023..8869290, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 4 NC_026932.1 (8846260..8849551, complement)

Chromosome 8 - NC_068572.1Genomic Context describing neighboring genes Neighboring gene lysine-specific demethylase JMJ31 Neighboring gene uncharacterized LOC128042903 Neighboring gene heat stress transcription factor A-7a Neighboring gene ETO1-like protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein indeterminate-domain 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068572.1 Reference ASM2569854v1 Primary Assembly

    Range
    8866023..8869290 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012618409.2 → XP_012473863.2  protein indeterminate-domain 12

Nucleotide Protein
Heading Accession and Version

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