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LOC105787310 protein REVEILLE 7 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105787310, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105787310
Gene description
protein REVEILLE 7
Locus tag
B456_001G069700
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105787310 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 7 NC_068571.1 (46468176..46471410, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 1 NC_026929.1 (7032757..7036011)

Chromosome 7 - NC_068571.1Genomic Context describing neighboring genes Neighboring gene protein C2-DOMAIN ABA-RELATED 4 Neighboring gene guanine nucleotide-binding protein subunit beta-like protein Neighboring gene berberine bridge enzyme-like D-2 Neighboring gene berberine bridge enzyme-like D-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein REVEILLE 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068571.1 Reference ASM2569854v1 Primary Assembly

    Range
    46468176..46471410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012613695.2 → XP_012469149.1  protein REVEILLE 7

    See identical proteins and their annotated locations for XP_012469149.1

    UniProtKB/TrEMBL
    A0A0D2QLN3
    Conserved Domains (2) summary
    smart00717
    Location:54 → 101
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cl21498
    Location:52 → 102
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...

  2. XM_012613686.2 → XP_012469140.1  protein REVEILLE 7

    See identical proteins and their annotated locations for XP_012469140.1

    UniProtKB/TrEMBL
    A0A0D2QLN3
    Conserved Domains (2) summary
    smart00717
    Location:54 → 101
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cl21498
    Location:52 → 102
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
Nucleotide Protein
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