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LOC105786430 DNA-binding protein S1FA [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105786430, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105786430
Gene description
DNA-binding protein S1FA
Locus tag
B456_002G249300
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105786430 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 1 NC_068565.1 (50995266..50997604)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 2 NC_026930.1 (61334306..61336722)

Chromosome 1 - NC_068565.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At5g14770, mitochondrial Neighboring gene L-type lectin-domain containing receptor kinase VIII.1 Neighboring gene cell number regulator 8 Neighboring gene uncharacterized LOC128039783

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein S1FA

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068565.1 Reference ASM2569854v1 Primary Assembly

    Range
    50995266..50997604
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012612850.2 → XP_012468304.1  DNA-binding protein S1FA

    See identical proteins and their annotated locations for XP_012468304.1

    UniProtKB/TrEMBL
    A0A0D2MFR0, A0A0D2QIR0
    Conserved Domains (1) summary
    pfam04689
    Location:17 → 82
    S1FA; DNA binding protein S1FA
Nucleotide Protein
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