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LOC105781235 zinc finger protein WIP2 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105781235, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105781235
Gene description
zinc finger protein WIP2
Locus tag
B456_013G250800
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105781235 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 13 NC_068577.1 (57305606..57307740, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 13 NC_026941.1 (56845487..56847847, complement)

Chromosome 13 - NC_068577.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105783502 Neighboring gene DNA damage-repair/toleration protein DRT100 Neighboring gene extensin-2 Neighboring gene extensin-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein WIP2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068577.1 Reference ASM2569854v1 Primary Assembly

    Range
    57305606..57307740 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012605780.2 → XP_012461234.1  zinc finger protein WIP2

    See identical proteins and their annotated locations for XP_012461234.1

    UniProtKB/TrEMBL
    A0A0D2SJX9
    Conserved Domains (1) summary
    sd00017
    Location:249 → 265
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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