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LOC105781181 NAC domain-containing protein 104 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105781181, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105781181
Gene description
NAC domain-containing protein 104
Locus tag
B456_013G063500
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105781181 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 13 NC_068577.1 (6981361..6983032)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 13 NC_026941.1 (7082389..7084082)

Chromosome 13 - NC_068577.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105781232 Neighboring gene uncharacterized LOC128035934 Neighboring gene putative clathrin assembly protein At1g03050 Neighboring gene probable galacturonosyltransferase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in system development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAC domain-containing protein 104

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068577.1 Reference ASM2569854v1 Primary Assembly

    Range
    6981361..6983032
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012605732.2 → XP_012461186.1  NAC domain-containing protein 104

    See identical proteins and their annotated locations for XP_012461186.1

    UniProtKB/TrEMBL
    A0A0D2TW44
    Conserved Domains (1) summary
    pfam02365
    Location:13 → 54
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
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