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LOC105779811 protein ATAF2 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105779811, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105779811
Gene description
protein ATAF2
Locus tag
B456_012G037600
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105779811 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 4 NC_068568.1 (46007845..46009449)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 12 NC_026940.1 (4659079..4660698, complement)

Chromosome 4 - NC_068568.1Genomic Context describing neighboring genes Neighboring gene beta-galactosidase 6 Neighboring gene uncharacterized mitochondrial protein AtMg00810-like Neighboring gene aldehyde dehydrogenase family 3 member H1 Neighboring gene uncharacterized LOC105780687

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ATAF2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068568.1 Reference ASM2569854v1 Primary Assembly

    Range
    46007845..46009449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012603741.2 → XP_012459195.1  protein ATAF2

    See identical proteins and their annotated locations for XP_012459195.1

    UniProtKB/TrEMBL
    A0A0D2VV26, A0A7J8QHB5
    Conserved Domains (1) summary
    pfam02365
    Location:8 → 131
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
Heading Accession and Version

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