U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105774676 zinc finger protein GAI-ASSOCIATED FACTOR 1 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105774676, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105774676
Gene description
zinc finger protein GAI-ASSOCIATED FACTOR 1
Locus tag
B456_010G011200
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105774676 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 6 NC_068570.1 (845376..847754)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 10 NC_026938.1 (841526..843970)

Chromosome 6 - NC_068570.1Genomic Context describing neighboring genes Neighboring gene outer envelope pore protein 24A, chloroplastic Neighboring gene uncharacterized membrane protein At1g75140 Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
zinc finger protein GAI-ASSOCIATED FACTOR 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068570.1 Reference ASM2569854v1 Primary Assembly

    Range
    845376..847754
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012597236.2 → XP_012452690.1  zinc finger protein GAI-ASSOCIATED FACTOR 1

    See identical proteins and their annotated locations for XP_012452690.1

    UniProtKB/TrEMBL
    A0A0D2U6Z2
    Conserved Domains (1) summary
    sd00017
    Location:136 → 155
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases