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LOC105774263 NAC domain-containing protein 75 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105774263, updated on 10-Oct-2024

Summary

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Gene symbol
LOC105774263
Gene description
NAC domain-containing protein 75
Locus tag
B456_010G078900
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105774263 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 6 NC_068570.1 (11321251..11326278, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 10 NC_026938.1 (11417834..11423507, complement)

Chromosome 6 - NC_068570.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat extensin-like protein 4 Neighboring gene phosphatidylglycerophosphate phosphatase PTPMT2 Neighboring gene uncharacterized LOC105772984 Neighboring gene uncharacterized LOC105772983

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAC domain-containing protein 75
Names
probable nuclear hormone receptor HR38

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068570.1 Reference ASM2569854v1 Primary Assembly

    Range
    11321251..11326278 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012596692.2 → XP_012452146.1  NAC domain-containing protein 75 isoform X3

    UniProtKB/TrEMBL
    A0A0D2V765
    Conserved Domains (1) summary
    pfam02365
    Location:49 → 85
    NAM; No apical meristem (NAM) protein

  2. XM_012596691.2 → XP_012452145.1  NAC domain-containing protein 75 isoform X2

    See identical proteins and their annotated locations for XP_012452145.1

    UniProtKB/TrEMBL
    A0A0D2SP93, A0A0D2V765
    Conserved Domains (1) summary
    pfam02365
    Location:49 → 85
    NAM; No apical meristem (NAM) protein

  3. XM_012596689.2 → XP_012452143.1  NAC domain-containing protein 75 isoform X1

    See identical proteins and their annotated locations for XP_012452143.1

    UniProtKB/TrEMBL
    A0A0D2R3W2, A0A0D2V765
    Conserved Domains (1) summary
    pfam02365
    Location:49 → 85
    NAM; No apical meristem (NAM) protein

  4. XM_012596688.2 → XP_012452142.1  NAC domain-containing protein 75 isoform X1

    See identical proteins and their annotated locations for XP_012452142.1

    UniProtKB/TrEMBL
    A0A0D2R3W2, A0A0D2V765
    Conserved Domains (1) summary
    pfam02365
    Location:49 → 85
    NAM; No apical meristem (NAM) protein

  5. XM_052632896.1 → XP_052488856.1  NAC domain-containing protein 75 isoform X1

    UniProtKB/TrEMBL
    A0A0D2R3W2

  6. XM_012596695.2 → XP_012452149.1  NAC domain-containing protein 75 isoform X5

    UniProtKB/TrEMBL
    A0A0D2V762
    Conserved Domains (1) summary
    pfam02365
    Location:49 → 85
    NAM; No apical meristem (NAM) protein

  7. XM_012596693.2 → XP_012452147.1  NAC domain-containing protein 75 isoform X4

    UniProtKB/TrEMBL
    A0A0D2V762
    Conserved Domains (1) summary
    pfam02365
    Location:49 → 85
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
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