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LOC105769884 NAC domain-containing protein 16 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105769884, updated on 10-Oct-2024

Summary

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Gene symbol
LOC105769884
Gene description
NAC domain-containing protein 16
Locus tag
B456_009G260000
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105769884 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 5 NC_068569.1 (21610630..21614376)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 9 NC_026937.1 (21433352..21436874)

Chromosome 5 - NC_068569.1Genomic Context describing neighboring genes Neighboring gene probable F-actin-capping protein subunit beta Neighboring gene co-chaperone protein p23-1 Neighboring gene GDSL esterase/lipase At3g27950 Neighboring gene cleavage stimulating factor 64

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAC domain-containing protein 16; NAC domain-containing protein 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068569.1 Reference ASM2569854v1 Primary Assembly

    Range
    21610630..21614376
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052631283.1 → XP_052487243.1  NAC domain-containing protein 16 isoform X1

    UniProtKB/TrEMBL
    A0A0D2TVM3

  2. XM_052631282.1 → XP_052487242.1  NAC domain-containing protein 16 isoform X1

    UniProtKB/TrEMBL
    A0A0D2TVM3

  3. XM_012590833.2 → XP_012446287.1  NAC domain-containing protein 17 isoform X2

    See identical proteins and their annotated locations for XP_012446287.1

    UniProtKB/TrEMBL
    A0A0D2S8G4, A0A0D2TS02
    Conserved Domains (1) summary
    pfam02365
    Location:23 → 64
    NAM; No apical meristem (NAM) protein

  4. XM_012590831.2 → XP_012446285.1  NAC domain-containing protein 16 isoform X1

    See identical proteins and their annotated locations for XP_012446285.1

    UniProtKB/TrEMBL
    A0A0D2TVM3, A0A7J8Q2X8
    Conserved Domains (1) summary
    pfam02365
    Location:23 → 64
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
Heading Accession and Version

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