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LOC105769820 histone acetyltransferase of the MYST family 1 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105769820, updated on 25-Jan-2024

Summary

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Gene symbol
LOC105769820
Gene description
histone acetyltransferase of the MYST family 1
Locus tag
B456_009G242400
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105769820 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 5 NC_068569.1 (19537815..19542457, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 9 NC_026937.1 (19380757..19385417, complement)

Chromosome 5 - NC_068569.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105803230 Neighboring gene beta-1,3-galactosyltransferase 7 Neighboring gene uncharacterized LOC105770728 Neighboring gene glucan endo-1,3-beta-glucosidase Neighboring gene mitogen-activated protein kinase kinase kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone acetyltransferase of the MYST family 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068569.1 Reference ASM2569854v1 Primary Assembly

    Range
    19537815..19542457 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012590706.2 → XP_012446160.1  histone acetyltransferase of the MYST family 1

    See identical proteins and their annotated locations for XP_012446160.1

    UniProtKB/TrEMBL
    A0A0D2S7E1, A0A0D2UT38
    Conserved Domains (3) summary
    PLN00104
    Location:3 → 439
    PLN00104; MYST -like histone acetyltransferase; Provisional
    pfam11717
    Location:53 → 111
    Tudor-knot; RNA binding activity-knot of a chromodomain
    cl17182
    Location:151 → 434
    NAT_SF; N-Acyltransferase superfamily: Various enyzmes that characteristicly catalyze the transfer of an acyl group to a substrate
Nucleotide Protein
Heading Accession and Version

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