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LOC105768811 protein CUP-SHAPED COTYLEDON 3 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105768811, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105768811
Gene description
protein CUP-SHAPED COTYLEDON 3
Locus tag
B456_009G186000
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105768811 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 5 NC_068569.1 (14404006..14407286)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 9 NC_026937.1 (14302745..14306086)

Chromosome 5 - NC_068569.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105768757 Neighboring gene SWI/SNF complex subunit SWI3B Neighboring gene uncharacterized LOC128041051 Neighboring gene protein MULTIPLE CHLOROPLAST DIVISION SITE 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein CUP-SHAPED COTYLEDON 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068569.1 Reference ASM2569854v1 Primary Assembly

    Range
    14404006..14407286
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012589000.2 → XP_012444454.1  protein CUP-SHAPED COTYLEDON 3

    See identical proteins and their annotated locations for XP_012444454.1

    UniProtKB/TrEMBL
    A0A0D2TMA2
    Conserved Domains (1) summary
    pfam02365
    Location:24 → 65
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
Heading Accession and Version

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