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LOC105767813 homeobox-leucine zipper protein ATHB-22 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105767813, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105767813
Gene description
homeobox-leucine zipper protein ATHB-22
Locus tag
B456_009G409600
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105767813 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 4 NC_068568.1 (18146144..18147529, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 9 NC_026937.1 (61505456..61506816)

Chromosome 4 - NC_068568.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105767519 Neighboring gene uncharacterized LOC105767514 Neighboring gene F-box protein PP2-A15 Neighboring gene auxin-induced in root cultures protein 12-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox-leucine zipper protein ATHB-22

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068568.1 Reference ASM2569854v1 Primary Assembly

    Range
    18146144..18147529 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012587384.2 → XP_012442838.2  homeobox-leucine zipper protein ATHB-22

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases