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LOC105765939 zinc finger protein 1 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105765939, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105765939
Gene description
zinc finger protein 1
Locus tag
B456_009G124600
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105765939 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 5 NC_068569.1 (9449175..9450309)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 9 NC_026937.1 (9383267..9384359)

Chromosome 5 - NC_068569.1Genomic Context describing neighboring genes Neighboring gene factor of DNA methylation 1 Neighboring gene aquaporin NIP6-1 Neighboring gene uncharacterized protein At2g39795, mitochondrial Neighboring gene deSI-like protein At4g17486

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of abscisic acid-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068569.1 Reference ASM2569854v1 Primary Assembly

    Range
    9449175..9450309
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012585220.2 → XP_012440674.1  zinc finger protein 1

    See identical proteins and their annotated locations for XP_012440674.1

    UniProtKB/TrEMBL
    A0A0D2UL07
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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