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LOC105761664 transcription factor bHLH48 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105761664, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105761664
Gene description
transcription factor bHLH48
Locus tag
B456_007G361700
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105761664 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 11 NC_068575.1 (1544940..1549728)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 7 NC_026935.1 (59342172..59347001, complement)

Chromosome 11 - NC_068575.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L6-1 Neighboring gene protein POLYCHOME Neighboring gene uncharacterized LOC105761662 Neighboring gene uncharacterized LOC105761663

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: transcription factor bHLH48

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068575.1 Reference ASM2569854v1 Primary Assembly

    Range
    1544940..1549728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012579538.2 → XP_012434992.2  LOW QUALITY PROTEIN: transcription factor bHLH48

Nucleotide Protein
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