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LOC105647433 transcription factor bHLH149 [ Jatropha curcas ]

Gene ID: 105647433, updated on 14-Dec-2023

Summary

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Gene symbol
LOC105647433
Gene description
transcription factor bHLH149
Locus tag
JCGZ_23231
Gene type
protein coding
RefSeq status
MODEL
Organism
Jatropha curcas
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Genomic context

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See LOC105647433 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current RJC1_Hi-C (GCF_014843425.1) Unplaced Scaffold NW_023591480.1 (448294..449737, complement)
101 previous assembly JatCur_1.0 (GCF_000696525.1) Unplaced Scaffold NW_012125068.1 (1001202..1002413)

NW_023591480.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105647434 Neighboring gene U5 spliceosomal RNA Neighboring gene protein SUPPRESSOR OF QUENCHING 1, chloroplastic Neighboring gene uncharacterized LOC105647816

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor bHLH149

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jatropha curcas Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RJC1_Hi-C Primary Assembly

Genomic

  1. NW_023591480.1 Reference RJC1_Hi-C Primary Assembly

    Range
    448294..449737 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037640704.1 → XP_037496632.1  transcription factor bHLH149

    UniProtKB/TrEMBL
    A0A067JKQ5
    Conserved Domains (1) summary
    cd11444
    Location:136 → 188
    bHLH_AtIBH1_like; basic helix-loop-helix (bHLH) domain found in Arabidopsis thaliana ILI1-BINDING BHLH 1 (IBH1) and similar proteins

  2. XM_037640703.1 → XP_037496631.1  transcription factor bHLH149

    UniProtKB/TrEMBL
    A0A067JKQ5
    Conserved Domains (1) summary
    cd11444
    Location:136 → 188
    bHLH_AtIBH1_like; basic helix-loop-helix (bHLH) domain found in Arabidopsis thaliana ILI1-BINDING BHLH 1 (IBH1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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