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LOC105379376 uncharacterized LOC105379376 [ Homo sapiens (human) ]

Gene ID: 105379376, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105379376
Gene description
uncharacterized LOC105379376
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward fat (RPKM 1.3) See more
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Genomic context

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See LOC105379376 in Genome Data Viewer
Location:
8p11.23
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (36963696..36982005, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (37239754..37258079, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene potassium calcium-activated channel subfamily U member 1 Neighboring gene mitochondrial ribosomal protein S7 pseudogene 1 Neighboring gene uncharacterized LOC105379375 Neighboring gene TPT1 pseudogene 8 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr8:36780820-36782019 Neighboring gene NANOG hESC enhancer GRCh37_chr8:36807536-36808072 Neighboring gene ribosomal protein L26 pseudogene 25 Neighboring gene uncharacterized LOC105379377

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    36963696..36982005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_949674.2 RNA Sequence

  2. XR_949673.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    37239754..37258079 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078582.1 RNA Sequence

  2. XR_007078581.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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