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LOC105376328 uncharacterized LOC105376328 [ Homo sapiens (human) ]

Gene ID: 105376328, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105376328
Gene description
uncharacterized LOC105376328
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in prostate (RPKM 1.6), colon (RPKM 1.6) and 5 other tissues See more
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Genomic context

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See LOC105376328 in Genome Data Viewer
Location:
9q34.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (137155022..137161060, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (149392743..149398842, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20581 Neighboring gene uncharacterized LOC124902314 Neighboring gene dipeptidyl peptidase 7 Neighboring gene small nucleolar RNA U13 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29345 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20582 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20583 Neighboring gene Sharpr-MPRA regulatory region 8071 Neighboring gene glutamate ionotropic receptor NMDA type subunit 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29346 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:140057239-140057738 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:140062142-140063006 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20585 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20586 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20587 Neighboring gene microRNA 3621 Neighboring gene leucine rich repeat containing 26 Neighboring gene transmembrane protein 210

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    137155022..137161060 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007061876.1 RNA Sequence

  2. XR_007061877.1 RNA Sequence

  3. XR_007061878.1 RNA Sequence

  4. XR_007061875.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    149392743..149398842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007080157.1 RNA Sequence

  2. XR_007080155.1 RNA Sequence

  3. XR_007080154.1 RNA Sequence

  4. XR_007080153.1 RNA Sequence

  5. XR_007080152.1 RNA Sequence

  6. XR_007080156.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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