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LOC105376244 uncharacterized LOC105376244 [ Homo sapiens (human) ]

Gene ID: 105376244, updated on 17-Jun-2024

Summary

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Gene symbol
LOC105376244
Gene description
uncharacterized LOC105376244
See related
Ensembl:ENSG00000284977
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105376244 in Genome Data Viewer
Location:
9q33.1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (117759457..117871229)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (129953040..130061920)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene NANOG hESC enhancer GRCh37_chr9:120449653-120450182 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr9:120466103-120467302 Neighboring gene ribosomal protein L35a pseudogene 22 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr9:120467367-120468566 Neighboring gene RNA, U6 small nuclear 1082, pseudogene Neighboring gene toll like receptor 4 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr9:120525140-120526339 Neighboring gene uncharacterized LOC105376243 Neighboring gene uncharacterized LOC105376246 Neighboring gene uncharacterized LOC105376247 Neighboring gene MPRA-validated peak7325 silencer Neighboring gene TPT1 pseudogene 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    117759457..117871229
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007061905.1 RNA Sequence

  2. XR_007061907.1 RNA Sequence

  3. XR_007061906.1 RNA Sequence

  4. XR_001746916.2 RNA Sequence

    Related
    ENST00000661126.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    129953040..130061920
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007080264.1 RNA Sequence

  2. XR_007080265.1 RNA Sequence

  3. XR_007080266.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials