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MITA1 metabolism induced tumor activator 1 [ Homo sapiens (human) ]

Gene ID: 105375914, updated on 17-Jun-2024

Summary

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Official Symbol
MITA1provided by HGNC
Official Full Name
metabolism induced tumor activator 1provided by HGNC
Primary source
HGNC:HGNC:56733
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See MITA1 in Genome Data Viewer
Location:
8q21.13
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (78804472..78937709)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (79236938..79369084)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene interleukin 7 Neighboring gene C4orf46 pseudogene 3 Neighboring gene THAP domain containing 12 pseudogene 7 Neighboring gene MPRA-validated peak7081 silencer Neighboring gene long intergenic non-protein coding RNA 2605 Neighboring gene uncharacterized LOC105375912 Neighboring gene NANOG hESC enhancer GRCh37_chr8:79819781-79820282 Neighboring gene uncharacterized LOC105375913 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr8:80031849-80033048 Neighboring gene uncharacterized LOC107986892

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Metabolism-induced tumor activator 1 (MITA1), an Energy Stress-Inducible Long Noncoding RNA, Promotes Hepatocellular Carcinoma Metastasis. Ma M, et al. Hepatology, 2019 Jul. PMID 30839115

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    78804472..78937709
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001745967.2 RNA Sequence

  2. XR_001745970.2 RNA Sequence

  3. XR_001745965.2 RNA Sequence

  4. XR_002956715.2 RNA Sequence

  5. XR_002956717.2 RNA Sequence

  6. XR_002956716.2 RNA Sequence

  7. XR_007060971.1 RNA Sequence

  8. XR_007060970.1 RNA Sequence

  9. XR_007060969.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    79236938..79369084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078595.1 RNA Sequence

  2. XR_007078596.1 RNA Sequence

  3. XR_007078593.1 RNA Sequence

  4. XR_007078594.1 RNA Sequence

Nucleotide Protein
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