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LOC105375655 uncharacterized LOC105375655 [ Homo sapiens (human) ]

Gene ID: 105375655, updated on 17-Jun-2024

Summary

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Gene symbol
LOC105375655
Gene description
uncharacterized LOC105375655
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105375655 in Genome Data Viewer
Location:
8q22.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (97150499..97184535)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900253 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:97563257-97563757 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:97592183-97592688 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:97601754-97602254 Neighboring gene syndecan 2 Neighboring gene Sharpr-MPRA regulatory region 4348 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19389 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:97731641-97732141 Neighboring gene carboxypeptidase Q Neighboring gene uncharacterized LOC124901985 Neighboring gene uncharacterized LOC101927066 Neighboring gene Sharpr-MPRA regulatory region 10694 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:98217733-98218532 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:98218533-98219332 Neighboring gene Sharpr-MPRA regulatory region 2413 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:98226988-98227220 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:98244253-98244860 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:98289193-98289694 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:98331415-98331933 Neighboring gene Sharpr-MPRA regulatory region 7239 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:98346916-98347522 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:98347523-98348128 Neighboring gene TSPY like 5 Neighboring gene small nucleolar RNA, C/D box 3H

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000008.11 Chromosome 8 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    97150499..97184535
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_928434.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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