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LOC105375363 uncharacterized LOC105375363 [ Homo sapiens (human) ]

Gene ID: 105375363, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105375363
Gene description
uncharacterized LOC105375363
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in thyroid (RPKM 1.3), lung (RPKM 0.5) and 24 other tissues See more
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Genomic context

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See LOC105375363 in Genome Data Viewer
Location:
7q11.23
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (77653341..77658421)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (78905244..78907766)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901681 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:77154891-77155392 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:77155393-77155892 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26205 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26206 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18324 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18325 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18326 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:77169285-77169866 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:77185513-77186127 Neighboring gene protein tyrosine phosphatase non-receptor type 12 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:77305655-77305829 Neighboring gene Alu-mediated CDKN1A/p21 transcriptional regulator Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:77321385-77321884 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:77324871-77325766 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:77325767-77326662 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18329 Neighboring gene round spermatid basic protein 1 like Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:77393580-77394080 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26208 Neighboring gene transmembrane protein 60

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    77653341..77658421
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007060397.1 RNA Sequence

  2. XR_927695.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    78905244..78907766
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007077639.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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