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LOC105375268 uncharacterized LOC105375268 [ Homo sapiens (human) ]

Gene ID: 105375268, updated on 22-Oct-2024

Summary

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Gene symbol
LOC105375268
Gene description
uncharacterized LOC105375268
See related
Ensembl:ENSG00000229192
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105375268 in Genome Data Viewer
Location:
7p12.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (47000620..47079809, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (47162079..47241264, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901626 Neighboring gene uncharacterized LOC105375267 Neighboring gene uncharacterized LOC124901627 Neighboring gene NANOG hESC enhancer GRCh37_chr7:47078694-47079476 Neighboring gene mitochondrial ribosomal protein L42 pseudogene 4 Neighboring gene MPRA-validated peak6510 silencer Neighboring gene serine and arginine rich splicing factor 8C, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:47162015-47162514 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25975 Neighboring gene MPRA-validated peak6511 silencer Neighboring gene uncharacterized LOC124901628 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18166 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25976 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr7:47332661-47333860 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:47354649-47355451 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:47366159-47366764 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:47383941-47384441 Neighboring gene tensin 3 Neighboring gene uncharacterized LOC124901629 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18167

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

General gene information

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Clone Names

  • AC004870.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    47000620..47079809 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_927249.1 RNA Sequence

    Related
    ENST00000739918.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    47162079..47241264 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078473.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials