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LOC105374786 uncharacterized LOC105374786 [ Homo sapiens (human) ]

Gene ID: 105374786, updated on 17-Sep-2024

Summary

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Gene symbol
LOC105374786
Gene description
uncharacterized LOC105374786
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC105374786 in Genome Data Viewer
Location:
2p14
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (67552812..67651030, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (67562440..67660709, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124907804 Neighboring gene uncharacterized LOC124906017 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:67792784-67793983 Neighboring gene long intergenic non-protein coding RNA 2831 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_58914 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:67873164-67873664 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:67873665-67874165 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:68035929-68037128 Neighboring gene long intergenic non-protein coding RNA 1812 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:68146782-68147981 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:68222082-68222296 Neighboring gene FBXL12 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    67552812..67651030 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001739524.2 RNA Sequence

  2. XR_940218.4 RNA Sequence

  3. XR_940216.4 RNA Sequence

  4. XR_940217.4 RNA Sequence

  5. XR_007086626.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    67562440..67660709 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007072163.1 RNA Sequence

  2. XR_007072165.1 RNA Sequence

  3. XR_007072162.1 RNA Sequence

  4. XR_007072164.1 RNA Sequence

  5. XR_007072161.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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