U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

NXTAR negative expression of androgen receptor regulating lncRNA [ Homo sapiens (human) ]

Gene ID: 105373241, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
NXTARprovided by HGNC
Official Full Name
negative expression of androgen receptor regulating lncRNAprovided by HGNC
Primary source
HGNC:HGNC:56212
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See NXTAR in Genome Data Viewer
Location:
Xq12
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (67744949..67784890, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (66174809..66216878, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene poly(A) binding protein nuclear 1 pseudogene Neighboring gene androgen receptor repeat instability region Neighboring gene androgen receptor Neighboring gene Sharpr-MPRA regulatory region 14511 Neighboring gene BMI1 proto-oncogene, polycomb ring finger pseudogene 1 Neighboring gene NANOG hESC enhancer GRCh37_chrX:67280228-67280729 Neighboring gene oligophrenin 1 Neighboring gene phosphoglycerate kinase 1 pseudogene 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Loss of Long Noncoding RNA NXTAR in Prostate Cancer Augments Androgen Receptor Expression and Enzalutamide Resistance. Ghildiyal R, et al. Cancer Res, 2022 Jan 1. PMID 34740892, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

Genotypes

General gene information

Go to the top of the page Help

Other Names

  • next to androgen receptor

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    67744949..67784890 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_938423.3 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    66174809..66216878 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007091203.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials