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OXA1L-DT OXA1L divergent transcript [ Homo sapiens (human) ]

Gene ID: 105370404, updated on 22-Oct-2024

Summary

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Official Symbol
OXA1L-DTprovided by HGNC
Official Full Name
OXA1L divergent transcriptprovided by HGNC
Primary source
HGNC:HGNC:55448
See related
Ensembl:ENSG00000258458 AllianceGenome:HGNC:55448
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See OXA1L-DT in Genome Data Viewer
Location:
14q11.2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (22704220..22766562, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene ribosomal protein L26 pseudogene 2 Neighboring gene olfactory receptor family 6 subfamily E member 1 pseudogene Neighboring gene von Willebrand factor A domain containing 5B2 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8138 Neighboring gene small nucleolar RNA SNORD41 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:23234492-23235055 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:23235056-23235618 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:23235619-23236182 Neighboring gene OXA1L mitochondrial inner membrane protein Neighboring gene ReSE screen-validated silencer GRCh37_chr14:23252646-23252816 Neighboring gene solute carrier family 7 member 7 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8140 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8141 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8142 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5588 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5589 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5590 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:23283939-23284445 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 8143

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000014.9 Chromosome 14 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    22704220..22766562 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001750638.3 RNA Sequence

  2. XR_007064072.1 RNA Sequence

    Related
    ENST00000807465.1

  3. XR_007064071.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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