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LOC104445739 homeobox-leucine zipper protein MERISTEM L1 [ Eucalyptus grandis ]

Gene ID: 104445739, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104445739
Gene description
homeobox-leucine zipper protein MERISTEM L1
Locus tag
EUGRSUZ_E04108
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104445739 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 5 NC_052616.1 (57162644..57168443)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092442.1 (70274290..70280059, complement)

Chromosome 5 - NC_052616.1Genomic Context describing neighboring genes Neighboring gene CRIB domain-containing protein RIC10 Neighboring gene uncharacterized LOC120293360 Neighboring gene COBRA-like protein 10 Neighboring gene uncharacterized LOC104447612 Neighboring gene F-box/LRR-repeat protein At4g14103

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox-leucine zipper protein MERISTEM L1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052616.1 Reference ASM1654582v1 Primary Assembly

    Range
    57162644..57168443
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039312466.1 → XP_039168400.1  homeobox-leucine zipper protein MERISTEM L1

    UniProtKB/TrEMBL
    A0A059CAG5
    Conserved Domains (2) summary
    cd08875
    Location:252 → 477
    START_ArGLABRA2_like; C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins
    pfam00046
    Location:73 → 126
    Homeobox; Homeobox domain

  2. XM_010059667.3 → XP_010057969.2  homeobox-leucine zipper protein MERISTEM L1

    UniProtKB/TrEMBL
    A0A059CAG5
    Conserved Domains (2) summary
    cd08875
    Location:252 → 477
    START_ArGLABRA2_like; C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins
    pfam00046
    Location:73 → 126
    Homeobox; Homeobox domain

  3. XM_018872950.2 → XP_018728495.2  homeobox-leucine zipper protein MERISTEM L1

    UniProtKB/TrEMBL
    A0A059CAG5
    Conserved Domains (2) summary
    cd08875
    Location:252 → 477
    START_ArGLABRA2_like; C-terminal lipid-binding START domain of the Arabidopsis homeobox protein GLABRA 2 and related proteins
    pfam00046
    Location:73 → 126
    Homeobox; Homeobox domain
Nucleotide Protein
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