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LOC104445258 squamosa promoter-binding-like protein 3 [ Eucalyptus grandis ]

Gene ID: 104445258, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104445258
Gene description
squamosa promoter-binding-like protein 3
Locus tag
EUGRSUZ_E03260
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 5 NC_052616.1 (46226846..46230133, complement)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092442.1 (55296480..55299751, complement)

Chromosome 5 - NC_052616.1Genomic Context describing neighboring genes Neighboring gene glyoxysomal processing protease, glyoxysomal Neighboring gene mitochondrial arginine transporter BAC1 Neighboring gene dof zinc finger protein DOF1.4 Neighboring gene uncharacterized LOC104445260

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in flower development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
squamosa promoter-binding-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052616.1 Reference ASM1654582v1 Primary Assembly

    Range
    46226846..46230133 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010059090.3 → XP_010057392.1  squamosa promoter-binding-like protein 3

    See identical proteins and their annotated locations for XP_010057392.1

    UniProtKB/TrEMBL
    A0A059C8J5
    Conserved Domains (1) summary
    pfam03110
    Location:63 → 137
    SBP; SBP domain
Nucleotide Protein
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