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LOC104441811 homeobox protein HD1 [ Eucalyptus grandis ]

Gene ID: 104441811, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104441811
Gene description
homeobox protein HD1
Locus tag
EUGRSUZ_D01935
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104441811 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 4 NC_052615.1 (31099185..31103419, complement)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092441.1 (33355503..33359642, complement)

Chromosome 4 - NC_052615.1Genomic Context describing neighboring genes Neighboring gene phospholipase D beta 1 Neighboring gene bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase Neighboring gene uncharacterized LOC120292700 Neighboring gene ubiquitin carboxyl-terminal hydrolase MINDY-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein HD1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052615.1 Reference ASM1654582v1 Primary Assembly

    Range
    31099185..31103419 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039311384.1 → XP_039167318.1  homeobox protein HD1

    UniProtKB/TrEMBL
    A0A059CHH5
    Conserved Domains (3) summary
    pfam03790
    Location:34 → 72
    KNOX1; KNOX1 domain
    pfam03791
    Location:93 → 144
    KNOX2; KNOX2 domain
    pfam05920
    Location:241 → 280
    Homeobox_KN; Homeobox KN domain
Nucleotide Protein
Heading Accession and Version

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