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LOC104438439 protein FAR-RED IMPAIRED RESPONSE 1 [ Eucalyptus grandis ]

Gene ID: 104438439, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104438439
Gene description
protein FAR-RED IMPAIRED RESPONSE 1
Locus tag
EUGRSUZ_C04090
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104438439 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 3 NC_052614.1 (70564640..70570036)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092440.1 (75512221..75517619, complement)

Chromosome 3 - NC_052614.1Genomic Context describing neighboring genes Neighboring gene putative glycerol-3-phosphate transporter 5 Neighboring gene 110 kDa U5 small nuclear ribonucleoprotein component CLO Neighboring gene uncharacterized LOC104438435 Neighboring gene small nuclear ribonucleoprotein SmD3b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAR-RED IMPAIRED RESPONSE 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052614.1 Reference ASM1654582v1 Primary Assembly

    Range
    70564640..70570036
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010051586.3 → XP_010049888.2  protein FAR-RED IMPAIRED RESPONSE 1 isoform X1

    UniProtKB/TrEMBL
    A0A059CW52
    Conserved Domains (1) summary
    PLN03097
    Location:1 → 823
    FHY3; Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional

  2. XM_010051587.3 → XP_010049889.2  protein FAR-RED IMPAIRED RESPONSE 1 isoform X2

    UniProtKB/TrEMBL
    A0A059CWF7
    Conserved Domains (1) summary
    PLN03097
    Location:1 → 807
    FHY3; Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional
Nucleotide Protein
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