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LOC104437326 transcription factor bHLH35 [ Eucalyptus grandis ]

Gene ID: 104437326, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104437326
Gene description
transcription factor bHLH35
Locus tag
EUGRSUZ_C02208
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104437326 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 3 NC_052614.1 (35522432..35528117, complement)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092440.1 (40423945..40429666, complement)

Chromosome 3 - NC_052614.1Genomic Context describing neighboring genes Neighboring gene RING-H2 finger protein ATL43 Neighboring gene RNA-binding KH domain-containing protein PEPPER Neighboring gene probable inactive purple acid phosphatase 28 Neighboring gene peroxidase 16

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: transcription factor bHLH35

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052614.1 Reference ASM1654582v1 Primary Assembly

    Range
    35522432..35528117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010050263.3 → XP_010048565.2  LOW QUALITY PROTEIN: transcription factor bHLH35

    UniProtKB/TrEMBL
    A0A059CQV2
    Conserved Domains (1) summary
    cl00081
    Location:45 → 111
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
Nucleotide Protein
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