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LOC104435877 zinc finger CCCH domain-containing protein 46 [ Eucalyptus grandis ]

Gene ID: 104435877, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104435877
Gene description
zinc finger CCCH domain-containing protein 46
Locus tag
EUGRSUZ_C00055
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104435877 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 3 NC_052614.1 (111574..119603)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092440.1 (3171131..3179120)

Chromosome 3 - NC_052614.1Genomic Context describing neighboring genes Neighboring gene disease resistance protein RPV1 Neighboring gene leucine-rich repeat extensin-like protein 2 Neighboring gene serine/threonine-protein kinase STY13 Neighboring gene serine/threonine-protein kinase STY13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCCH domain-containing protein 46

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052614.1 Reference ASM1654582v1 Primary Assembly

    Range
    111574..119603
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039309132.1 → XP_039165066.1  zinc finger CCCH domain-containing protein 46 isoform X2

    UniProtKB/TrEMBL
    A0A059CKZ1
    Conserved Domains (1) summary
    smart00356
    Location:4 → 27
    ZnF_C3H1; zinc finger

  2. XM_010048569.3 → XP_010046871.2  zinc finger CCCH domain-containing protein 46 isoform X1

    UniProtKB/TrEMBL
    A0A059CKZ1
    Conserved Domains (1) summary
    smart00356
    Location:4 → 27
    ZnF_C3H1; zinc finger
Nucleotide Protein
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