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LOC104433640 trihelix transcription factor GT-1 [ Eucalyptus grandis ]

Gene ID: 104433640, updated on 11-Nov-2023

Summary

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Gene symbol
LOC104433640
Gene description
trihelix transcription factor GT-1
Locus tag
EUGRSUZ_B03456
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104433640 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 2 NC_052613.1 (52711455..52717334)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092439.1 (59342093..59347986)

Chromosome 2 - NC_052613.1Genomic Context describing neighboring genes Neighboring gene probable thimet oligopeptidase Neighboring gene signal recognition particle subunit SRP72 Neighboring gene mitotic spindle checkpoint protein MAD2 Neighboring gene transfer RNA valine (anticodon AAC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
trihelix transcription factor GT-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052613.1 Reference ASM1654582v1 Primary Assembly

    Range
    52711455..52717334
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010046453.3 → XP_010044755.1  trihelix transcription factor GT-1

    See identical proteins and their annotated locations for XP_010044755.1

    UniProtKB/TrEMBL
    A0A059D8Y4
    Conserved Domains (2) summary
    smart00717
    Location:99 → 158
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    cd12203
    Location:99 → 164
    GT1; GT1, myb-like, SANT family
Nucleotide Protein
Heading Accession and Version

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