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LOC104427346 scarecrow-like protein 9 [ Eucalyptus grandis ]

Gene ID: 104427346, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104427346
Gene description
scarecrow-like protein 9
Locus tag
EUGRSUZ_K01383
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104427346 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
1
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 11 NC_052622.1 (18247337..18249065)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092448.1 (16982249..16995388)

Chromosome 11 - NC_052622.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104427340 Neighboring gene scarecrow-like protein 9 Neighboring gene uncharacterized LOC104427347 Neighboring gene uncharacterized LOC104427349

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: scarecrow-like protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052622.1 Reference ASM1654582v1 Primary Assembly

    Range
    18247337..18249065
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039305140.1 → XP_039161074.1  LOW QUALITY PROTEIN: scarecrow-like protein 9

    UniProtKB/TrEMBL
    A0A059A8A4
    Conserved Domains (1) summary
    pfam03514
    Location:213 → 574
    GRAS; GRAS domain family
Nucleotide Protein
Heading Accession and Version

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