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LOC104423121 trihelix transcription factor ASIL2 [ Eucalyptus grandis ]

Gene ID: 104423121, updated on 7-Dec-2023

Summary

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Gene symbol
LOC104423121
Gene description
trihelix transcription factor ASIL2
Locus tag
EUGRSUZ_J02994
Gene type
protein coding
RefSeq status
MODEL
Organism
Eucalyptus grandis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Genomic context

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See LOC104423121 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1654582v1 (GCF_016545825.1) 10 NC_052621.1 (36705546..36707833, complement)
101 previous assembly Egrandis1_0 (GCF_000612305.1) Unplaced Scaffold NW_010092447.1 (37130279..37132558, complement)

Chromosome 10 - NC_052621.1Genomic Context describing neighboring genes Neighboring gene heat shock 70 kDa protein 14 Neighboring gene pentatricopeptide repeat-containing protein At3g16010 Neighboring gene protein SYS1 homolog Neighboring gene probable sulfate transporter 3.4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trihelix transcription factor ASIL2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eucalyptus grandis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1654582v1 Primary Assembly

Genomic

  1. NC_052621.1 Reference ASM1654582v1 Primary Assembly

    Range
    36705546..36707833 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010035584.3 → XP_010033886.1  trihelix transcription factor ASIL2

    See identical proteins and their annotated locations for XP_010033886.1

    UniProtKB/TrEMBL
    A0A059AJ02
    Conserved Domains (1) summary
    pfam13837
    Location:169 → 251
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
Nucleotide Protein
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