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LOC104097487 basic helix-loop-helix protein A [ Nicotiana tomentosiformis ]

Gene ID: 104097487, updated on 14-Dec-2023

Summary

Gene symbol
LOC104097487
Gene description
basic helix-loop-helix protein A
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nicotiana tomentosiformis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Also known as
sAn1
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Genomic context

See LOC104097487 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Ntom_v01 (GCF_000390325.2) Unplaced Scaffold NW_008860069.1 (94767..105411, complement)

NW_008860069.1Genomic Context describing neighboring genes Neighboring gene preprotein translocase subunit SCY2, chloroplastic Neighboring gene uncharacterized LOC104097478 Neighboring gene uncharacterized LOC104097512

Genomic regions, transcripts, and products

Genomic Sequence:
NW_008860069 Unplaced Scaffold Reference Ntom_v01 Primary Assembly

General protein information

Preferred Names
basic helix-loop-helix protein A
Names
anthocyanin 1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001302525.1NP_001289454.1  basic helix-loop-helix protein A

    See identical proteins and their annotated locations for NP_001289454.1

    Status: PROVISIONAL

    Source sequence(s)
    HQ589211
    UniProtKB/TrEMBL
    F6KRH7
    Conserved Domains (2) summary
    smart00353
    Location:489537
    HLH; helix loop helix domain
    pfam14215
    Location:10192
    bHLH-MYC_N; bHLH-MYC and R2R3-MYB transcription factors N-terminal

RefSeqs of Annotated Genomes: Nicotiana tomentosiformis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ntom_v01 Primary Assembly

Genomic

  1. NW_008860069.1 Reference Ntom_v01 Primary Assembly

    Range
    94767..105411 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009604065.3XP_009602360.1  basic helix-loop-helix protein A isoform X2

    Conserved Domains (2) summary
    smart00353
    Location:484532
    HLH; helix loop helix domain
    pfam14215
    Location:10187
    bHLH-MYC_N; bHLH-MYC and R2R3-MYB transcription factors N-terminal
  2. XM_009604051.3XP_009602346.1  basic helix-loop-helix protein A isoform X1

    Conserved Domains (2) summary
    smart00353
    Location:489537
    HLH; helix loop helix domain
    pfam14215
    Location:10192
    bHLH-MYC_N; bHLH-MYC and R2R3-MYB transcription factors N-terminal