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WRKY71 probable WRKY transcription factor 71 [ Brassica rapa (field mustard) ]

Gene ID: 103828922, updated on 7-Dec-2023

Summary

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Gene symbol
WRKY71
Gene description
probable WRKY transcription factor 71
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Brassica rapa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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Location:
chromosome: A7
Exon count:
4
Annotation release Status Assembly Chr Location
103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A07 NC_024801.2 (10647322..10655743, complement)
101 previous assembly Brapa_1.0 (GCF_000309985.1) A7 NC_024801.1 (5911114..5912574, complement)

Chromosome A07 - NC_024801.2Genomic Context describing neighboring genes Neighboring gene DNA-directed RNA polymerase I subunit 2-like Neighboring gene glycine--tRNA ligase, mitochondrial 1 Neighboring gene DNA-binding protein DDB_G0278111 Neighboring gene uncharacterized LOC117126829

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization and co-expression analysis of WRKY orthologs involved in responses to multiple abiotic stresses in Pak-choi (Brassica campestris ssp. chinensis). Tang J, et al. BMC Plant Biol, 2013 Nov 25. PMID 24267479, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable WRKY transcription factor 71
Names
WRKY transcription factor 71

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001302016.1 → NP_001288945.1  probable WRKY transcription factor 71

    See identical proteins and their annotated locations for NP_001288945.1

    Status: PROVISIONAL

    Source sequence(s)
    KF430077
    UniProtKB/TrEMBL
    A0A397L986, A0A3P6B475, M4EN08, V5RH30
    Conserved Domains (1) summary
    smart00774
    Location:133 → 190
    WRKY; DNA binding domain

RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Brap_v3.01 Primary Assembly

Genomic

  1. NC_024801.2 Reference CAAS_Brap_v3.01 Primary Assembly

    Range
    10647322..10655743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033274208.1 → XP_033130099.1  probable WRKY transcription factor 71 isoform X1

    UniProtKB/TrEMBL
    A0A397L986, A0A3P6B475
    Conserved Domains (1) summary
    smart00774
    Location:136 → 193
    WRKY; DNA binding domain
Nucleotide Protein
Heading Accession and Version

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