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FOXG1-AS1 FOXG1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 103695363, updated on 17-Sep-2024

Summary

Official Symbol
FOXG1-AS1provided by HGNC
Official Full Name
FOXG1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:50663
See related
AllianceGenome:HGNC:50663
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FOXG1-AS
Expression
Low expression observed in reference dataset See more
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Genomic context

See FOXG1-AS1 in Genome Data Viewer
Location:
14q12
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (28725242..28765319, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (22923168..22963252, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (29194448..29234525, complement)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984684 Neighboring gene long intergenic non-protein coding RNA 2300 Neighboring gene eukaryotic translation initiation factor 4A1 pseudogene 12 Neighboring gene BTF3 pseudogene 2 Neighboring gene VISTA enhancer hs1064 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:29235124-29235648 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:29243497-29243996 Neighboring gene long intergenic non-protein coding RNA 1551 Neighboring gene forkhead box G1 Neighboring gene long intergenic non-protein coding RNA 2282

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_125758.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL049777

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    28725242..28765319 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    22923168..22963252 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)