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BHLH18 transcription factor bHLH106-like [ Malus domestica (apple) ]

Gene ID: 103440683, updated on 22-Oct-2023

Summary

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Gene symbol
BHLH18
Gene description
transcription factor bHLH106-like
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Malus domestica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus
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Genomic context

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See BHLH18 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM211411v1 (GCF_002114115.1) 14 NC_041802.1 (13120305..13122102)
101 previous assembly MalDomGD1.0 (GCF_000148765.1) 1 NC_024239.1 (25622976..25624773)

Chromosome 14 - NC_041802.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103441381 Neighboring gene probable auxin efflux carrier component 1b Neighboring gene cytochrome P450 714C2-like Neighboring gene fruit protein pKIWI502-like Neighboring gene CDPK-related kinase 7-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor bHLH106-like
Names
BHLH domain class transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001294355.1 → NP_001281284.1  transcription factor bHLH106-like

    See identical proteins and their annotated locations for NP_001281284.1

    Status: PROVISIONAL

    Source sequence(s)
    HM122455
    UniProtKB/TrEMBL
    D9ZIP1
    Conserved Domains (2) summary
    cd00083
    Location:70 → 119
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
    cl09141
    Location:155 → 197
    ACT; ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme

RefSeqs of Annotated Genomes: Malus domestica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211411v1 Primary Assembly

Genomic

  1. NC_041802.1 Reference ASM211411v1 Primary Assembly

    Range
    13120305..13122102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases