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mdm4 MDM4, p53 regulator [ Callorhinchus milii (elephant shark) ]

Gene ID: 103182466, updated on 7-Dec-2023

Summary

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Gene symbol
mdm4
Gene description
MDM4, p53 regulator
See related
Ensembl:ENSCMIG00000002017
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See mdm4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704760.1 (2367090..2378043, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890123.1 (2448933..2459081, complement)

NW_024704760.1Genomic Context describing neighboring genes Neighboring gene proline/arginine-rich end leucine-rich repeat protein Neighboring gene plasma membrane calcium-transporting ATPase 1 Neighboring gene G1/S-specific cyclin-D2 Neighboring gene TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor Neighboring gene uncharacterized LOC121850442

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conservation of all three p53 family members and Mdm2 and Mdm4 in the cartilaginous fish. Lane DP, et al. Cell Cycle, 2011 Dec 15. PMID 22107961, Free PMC Article
  2. Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). Tan YY, et al. PLoS One, 2012. PMID 23056606, Free PMC Article
  3. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MDM4, p53 regulator

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001292566.1 → NP_001279495.1  MDM4, p53 regulator

    See identical proteins and their annotated locations for NP_001279495.1

    Status: PROVISIONAL

    Source sequence(s)
    JN794077
    UniProtKB/TrEMBL
    A0A4W3GZU3, G9J1M2
    Conserved Domains (3) summary
    pfam00641
    Location:299 → 328
    zf-RanBP; Zn-finger in Ran binding protein and others
    pfam02201
    Location:22 → 103
    SWIB; SWIB/MDM2 domain
    pfam13920
    Location:439 → 486
    zf-C3HC4_3; Zinc finger, C3HC4 type (RING finger)

RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704760.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    2367090..2378043 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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