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STAC3 SH3 and cysteine rich domain 3 [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 103013638, updated on 11-Mar-2024

Summary

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Gene symbol
STAC3
Gene description
SH3 and cysteine rich domain 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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See STAC3 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 11 NC_080074.1 (59808278..59814532)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006726687.1 (10465778..10472016, complement)

Chromosome 11 - NC_080074.1Genomic Context describing neighboring genes Neighboring gene inhibin subunit beta C Neighboring gene R3H domain containing 2 Neighboring gene putative hydrolase RBBP9 Neighboring gene NDUFA4 mitochondrial complex associated like 2 Neighboring gene serine hydroxymethyltransferase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extrinsic component of cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SH3 and cysteine-rich domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080074.1 Reference mBalAcu1.1

    Range
    59808278..59814532
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007179645.3 → XP_007179707.1  SH3 and cysteine-rich domain-containing protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A383ZX54
    Conserved Domains (4) summary
    cd11834
    Location:306 → 356
    SH3_Stac_2; Second C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing proteins 1 and 3
    cd11986
    Location:247 → 299
    SH3_Stac3_1; First C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing protein 3 (Stac3)
    pfam00130
    Location:86 → 131
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    pfam16664
    Location:143 → 188
    STAC2_u1; Unstructured on SH3 and cysteine-rich domain-containing protein 2

  2. XM_007179646.3 → XP_007179708.1  SH3 and cysteine-rich domain-containing protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A383ZX57
    Conserved Domains (4) summary
    cd11834
    Location:269 → 319
    SH3_Stac_2; Second C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing proteins 1 and 3
    cd11986
    Location:210 → 262
    SH3_Stac3_1; First C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing protein 3 (Stac3)
    pfam00130
    Location:49 → 94
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    pfam16664
    Location:106 → 151
    STAC2_u1; Unstructured on SH3 and cysteine-rich domain-containing protein 2

  3. XM_007179647.3 → XP_007179709.1  SH3 and cysteine-rich domain-containing protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A383ZXQ2
    Conserved Domains (2) summary
    cd11834
    Location:124 → 174
    SH3_Stac_2; Second C-terminal Src homology 3 domain of SH3 and cysteine-rich domain-containing proteins 1 and 3
    cl17036
    Location:65 → 117
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein
Heading Accession and Version

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