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CLPTM1 CLPTM1 regulator of GABA type A receptor forward trafficking [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 103005306, updated on 6-Jun-2024

Summary

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Gene symbol
CLPTM1
Gene description
CLPTM1 regulator of GABA type A receptor forward trafficking
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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See CLPTM1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 19 NC_080082.1 (56393139..56423021)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006725499.1 (2085957..2116885)

Chromosome 19 - NC_080082.1Genomic Context describing neighboring genes Neighboring gene apolipoprotein C4 Neighboring gene apolipoprotein C2 Neighboring gene RELB proto-oncogene, NF-kB subunit Neighboring gene CLK4 associating serine/arginine rich protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative lipid scramblase CLPTM1
Names
CLPTM1, transmembrane protein
cleft lip and palate transmembrane protein 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080082.1 Reference mBalAcu1.1

    Range
    56393139..56423021
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057534670.1 → XP_057390653.1  putative lipid scramblase CLPTM1

    UniProtKB/TrEMBL
    A0A383YZ72
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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