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LOC102710323 transcription factor ILR3-like [ Oryza brachyantha (malo sina) ]

Gene ID: 102710323, updated on 7-Dec-2023

Summary

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Gene symbol
LOC102710323
Gene description
transcription factor ILR3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza brachyantha
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Genomic context

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See LOC102710323 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
102 current ObraRS2 (GCF_000231095.2) 8 NC_023170.2 (1486261..1488849, complement)
101 previous assembly Oryza_brachyantha.v1.4b (GCF_000231095.1) 8 NC_023170.1 (1537034..1539629, complement)

Chromosome 8 - NC_023170.2Genomic Context describing neighboring genes Neighboring gene mavicyanin-like Neighboring gene uclacyanin 1-like Neighboring gene pentatricopeptide repeat-containing protein At5g50390, chloroplastic Neighboring gene uncharacterized LOC102706773 Neighboring gene calcium/calmodulin-regulated receptor-like kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor ILR3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza brachyantha Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ObraRS2 Primary Assembly

Genomic

  1. NC_023170.2 Reference ObraRS2 Primary Assembly

    Range
    1486261..1488849 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006659749.3 → XP_006659812.1  transcription factor ILR3-like

    UniProtKB/TrEMBL
    J3MQ76
    Conserved Domains (2) summary
    pfam00010
    Location:77 → 126
    HLH; Helix-loop-helix DNA-binding domain
    cl21478
    Location:90 → 173
    ATP-synt_B; ATP synthase B/B' CF(0)
Nucleotide Protein
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