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LOC102700186 WRKY DNA-binding transcription factor 70-like [ Oryza brachyantha (malo sina) ]

Gene ID: 102700186, updated on 7-Dec-2023

Summary

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Gene symbol
LOC102700186
Gene description
WRKY DNA-binding transcription factor 70-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza brachyantha
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Genomic context

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See LOC102700186 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ObraRS2 (GCF_000231095.2) 11 NC_023173.2 (703484..706535, complement)
101 previous assembly Oryza_brachyantha.v1.4b (GCF_000231095.1) 11 NC_023173.1 (481563..485015, complement)

Chromosome 11 - NC_023173.2Genomic Context describing neighboring genes Neighboring gene vacuolar-sorting receptor 1-like Neighboring gene probable WRKY transcription factor 70 Neighboring gene WRKY DNA-binding transcription factor 70-like Neighboring gene uncharacterized LOC102700467

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WRKY DNA-binding transcription factor 70-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza brachyantha Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ObraRS2 Primary Assembly

Genomic

  1. NC_023173.2 Reference ObraRS2 Primary Assembly

    Range
    703484..706535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006662614.2 → XP_006662677.1  WRKY DNA-binding transcription factor 70-like

    UniProtKB/TrEMBL
    J3N5I8
    Conserved Domains (1) summary
    smart00774
    Location:44 → 105
    WRKY; DNA binding domain
Nucleotide Protein
Heading Accession and Version

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