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LOC102661579 ethylene-responsive transcription factor ERF117 [ Glycine max (soybean) ]

Gene ID: 102661579, updated on 7-Dec-2023

Summary

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Gene symbol
LOC102661579
Gene description
ethylene-responsive transcription factor ERF117
Locus tag
GLYMA_07G091100v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC102661579 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 7 NC_038243.2 (8379187..8380955)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 7 NC_038243.1 (8526139..8528000)

Chromosome 7 - NC_038243.2Genomic Context describing neighboring genes Neighboring gene translation initiation factor eIF-2B subunit beta Neighboring gene syntaxin-81-like Neighboring gene carbon catabolite repressor protein 4 homolog 5 Neighboring gene CONSTANS-like zinc finger protein Neighboring gene uncharacterized LOC100500620

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor ERF117

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038243.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    8379187..8380955
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041016948.1 → XP_040872882.1  ethylene-responsive transcription factor ERF117

    UniProtKB/TrEMBL
    K7L0J3
    Conserved Domains (1) summary
    smart00380
    Location:109 → 150
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
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