U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC102603993 WRKY transcription factor 44 [ Solanum tuberosum (potato) ]

Gene ID: 102603993, updated on 2-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC102603993
Gene description
WRKY transcription factor 44
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC102603993 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006238934.1 (1703285..1707730, complement)

NW_006238934.1Genomic Context describing neighboring genes Neighboring gene probable protein phosphatase 2C 38 Neighboring gene glutathione S-transferase L3-like Neighboring gene protein REVEILLE 8-like Neighboring gene 60S ribosomal protein L4-1-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006238934.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
WRKY transcription factor 44

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006238934.1 Reference SolTub_3.0 Primary Assembly

    Range
    1703285..1707730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015309548.1 → XP_015165034.1  WRKY transcription factor 44

    UniProtKB/TrEMBL
    M1AR97, M1AR98
    Conserved Domains (1) summary
    smart00774
    Location:193 → 248
    WRKY; DNA binding domain

  2. XM_015309545.1 → XP_015165031.1  WRKY transcription factor 44

    UniProtKB/TrEMBL
    M1AR97, M1AR98
    Conserved Domains (1) summary
    smart00774
    Location:193 → 248
    WRKY; DNA binding domain

  3. XM_015309543.1 → XP_015165029.1  WRKY transcription factor 44

    UniProtKB/TrEMBL
    M1AR97, M1AR98
    Conserved Domains (1) summary
    smart00774
    Location:193 → 248
    WRKY; DNA binding domain

  4. XM_015309541.1 → XP_015165027.1  WRKY transcription factor 44

    UniProtKB/TrEMBL
    M1AR97, M1AR98
    Conserved Domains (1) summary
    smart00774
    Location:193 → 248
    WRKY; DNA binding domain

  5. XM_015309542.1 → XP_015165028.1  WRKY transcription factor 44

    UniProtKB/TrEMBL
    M1AR97, M1AR98
    Conserved Domains (1) summary
    smart00774
    Location:193 → 248
    WRKY; DNA binding domain

  6. XM_015309547.1 → XP_015165033.1  WRKY transcription factor 44

    UniProtKB/TrEMBL
    M1AR97, M1AR98
    Conserved Domains (1) summary
    smart00774
    Location:193 → 248
    WRKY; DNA binding domain

  7. XM_006339232.2 → XP_006339294.2  WRKY transcription factor 44

    UniProtKB/TrEMBL
    M1AR97, M1AR98
    Conserved Domains (1) summary
    smart00774
    Location:193 → 248
    WRKY; DNA binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases