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LOC102600423 scarecrow-like protein 9 [ Solanum tuberosum (potato) ]

Gene ID: 102600423, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102600423
Gene description
scarecrow-like protein 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Genomic context

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See LOC102600423 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006238947.1 (514399..518218, complement)

NW_006238947.1Genomic Context describing neighboring genes Neighboring gene suppressor of disruption of TFIIS Neighboring gene uncharacterized protein At5g02240-like Neighboring gene uncharacterized LOC102600869 Neighboring gene uncharacterized LOC107059471

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006238947.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
scarecrow-like protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006238947.1 Reference SolTub_3.0 Primary Assembly

    Range
    514399..518218 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006340955.2 → XP_006341017.1  scarecrow-like protein 9

    UniProtKB/TrEMBL
    M1AHK3
    Conserved Domains (1) summary
    pfam03514
    Location:387 → 759
    GRAS; GRAS domain family

RNA

  1. XR_366814.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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