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LOC102593445 probable WRKY transcription factor 20 [ Solanum tuberosum (potato) ]

Gene ID: 102593445, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102593445
Gene description
probable WRKY transcription factor 20
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Also known as
StWRKY10
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Genomic context

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See LOC102593445 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006238986.1 (456567..463885)

NW_006238986.1Genomic Context describing neighboring genes Neighboring gene F-box/kelch-repeat protein At3g23880-like Neighboring gene uncharacterized LOC107060123 Neighboring gene uncharacterized LOC102590173 Neighboring gene uncharacterized LOC102593771

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006238986.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable WRKY transcription factor 20
Names
transcription factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006238986.1 Reference SolTub_3.0 Primary Assembly

    Range
    456567..463885
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006344821.2 → XP_006344883.1  probable WRKY transcription factor 20

    UniProtKB/TrEMBL
    M1CX69, M1CX70
    Conserved Domains (2) summary
    smart00774
    Location:427 → 484
    WRKY; DNA binding domain
    pfam03106
    Location:257 → 311
    WRKY; WRKY DNA -binding domain
Nucleotide Protein
Heading Accession and Version

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