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LOC102133065 T-cell surface glycoprotein CD3 epsilon chain-like [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 102133065, updated on 11-Jun-2024

Summary

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Gene symbol
LOC102133065
Gene description
T-cell surface glycoprotein CD3 epsilon chain-like
See related
Ensembl:ENSMFAG00000040556
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
CD3E
Orthologs
human mouse all
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Genomic context

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See LOC102133065 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 14 NC_088388.1 (117109097..117171469)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 14 NC_052268.1 (16203190..16214633, complement)

Chromosome 14 - NC_088388.1Genomic Context describing neighboring genes Neighboring gene sodium voltage-gated channel beta subunit 2 Neighboring gene junction adhesion molecule like Neighboring gene myelin protein zero like 3 Neighboring gene myelin protein zero like 2 Neighboring gene T-cell surface glycoprotein CD3 delta chain-like Neighboring gene T-cell surface glycoprotein CD3 gamma chain-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CD3 polymorphism in cynomolgus monkeys (Macaca fascicularis). Uda A, et al. J Med Primatol, 2001 Jun. PMID 11515669

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive thymic T cell selection IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha-beta T cell receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-cell surface glycoprotein CD3 epsilon chain
Names
CD3 epsilon FN18+
CD3 epsilon FN18-
CD3e molecule, epsilon (CD3-TCR complex)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088388.1 Reference T2T-MFA8v1.0

    Range
    117109097..117171469
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065529028.1 → XP_065385100.1  T-cell surface glycoprotein CD3 epsilon chain

  2. XM_065529032.1 → XP_065385104.1  T-cell surface glycoprotein CD3 epsilon chain

  3. XM_065529031.1 → XP_065385103.1  T-cell surface glycoprotein CD3 epsilon chain

  4. XM_065529030.1 → XP_065385102.1  T-cell surface glycoprotein CD3 epsilon chain

  5. XM_065529034.1 → XP_065385106.1  T-cell surface glycoprotein CD3 epsilon chain

  6. XM_065529033.1 → XP_065385105.1  T-cell surface glycoprotein CD3 epsilon chain

  7. XM_065529035.1 → XP_065385107.1  T-cell surface glycoprotein CD3 epsilon chain

  8. XM_065529036.1 → XP_065385108.1  T-cell surface glycoprotein CD3 epsilon chain

  9. XM_065529037.1 → XP_065385109.1  T-cell surface glycoprotein CD3 epsilon chain

  10. XM_015435352.3 → XP_015290838.2  T-cell surface glycoprotein CD3 epsilon chain

    UniProtKB/Swiss-Prot
    Q95LI5, Q95LI6
    UniProtKB/TrEMBL
    A0A2K5TR92, G7PP33
    Conserved Domains (3) summary
    smart00077
    Location:176 → 196
    ITAM; Immunoreceptor tyrosine-based activation motif
    pfam16681
    Location:36 → 112
    Ig_5; Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain
    cd00096
    Location:36 → 42
    Ig; Ig strand A [structural motif]

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001283615.1: Suppressed sequence

    Description
    NM_001283615.1: This RefSeq record was removed as a result of standard genome annotation processing. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q95LI5.2 GenPept UniProtKB/Swiss-Prot:Q95LI5

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